PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023534771.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 189aa    MW: 21060.1 Da    PI: 11.061
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023534771.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.92.1e-0999140854
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     + r+RR+ri +++  L++l+P       +K++ a++L +Av+Y+k L
  XP_023534771.1  99 AARQRRERISQKIRILQRLVPGG-----TKMDTASMLDEAVHYVKFL 140
                     569******************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MSSTILLNNN NNNLHYPPLP FFSDFSSPSF HTAQAALPNH HHQNRQKRGG GGGGGGGMAA  60
MREMIFRIAA MQPIQIDPEE IKAPKRRNVR ISKDPQSVAA RQRRERISQK IRILQRLVPG  120
GTKMDTASML DEAVHYVKFL KRQVQTLEQA GFHNTTNSNN CPNLTYSSAL FKACQMPHAP  180
SMSGSLQMH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1101106RQRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.14e-46bHLH family protein