PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023534807.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Nin-like

Protein Properties

Length: 903aa MW: 99849.7 Da PI: 7.541

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023534807.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.4	7.1e-29	503	554	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isl++l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ XP_023534807.1 503 AEKSISLDVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 554 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 903 aa Download sequence
MMATIPNLLP MLALFLLRAG TSNLNSVPQK PIENHKFKIL PVPSENPDGY CLIKEKMAQA 60 LRYIKDLSDQ QVLAQVWAPV KNGDKVVLST SGQPFVLDTQ SNGLHRYRLV SLTYMFSLDT 120 ELDGSLGLPG RVFQQKLPEW TPNVQYYSSK EYSRLRHALD YNVQGTLALP VFDPSGQSCL 180 GVLELIMTSP RINYAPEVDK VCKALQAVNL KSSEILDRPN IQICNEGRQN ALAEILAVLT 240 VVCETHNLPL AQTWVPCRHR NVLANGGGLK KSCTSFDGSC MGRICMSATE VASYVVDAHK 300 WGFREACLEH HLQKGQGVSG RAFSSHSSCF CGDITQFCKN EYPLVHYALM FGLKSCFSIC 360 LRSKFTGDDE YILEFFLPPS LVDYQEQKTL LGAMMATMKQ HFYTLKVASG IKLEEGGIVE 420 VVQASRNGGF ESRLECIHIP PESDAMPNTG EVVALETLQQ RSLMVHDAPK DENNTVRDRE 480 SDNPVPCVQK EVKKTSKRKR GKAEKSISLD VLQQYFAGSL KDAAKSLGVC PTTMKRICRQ 540 HGISRWPSRK INKVNRSLSK LKRVIDSVQG NEGTFGMSSL ATSPLPVAVS SSSHPLTPDG 600 SNQNFFFASQ PSDPQRKETN TSEAQTNNTQ ARLKDQLHRG VSNPEELFHE QNGSLMKLGN 660 GFNNFRTGSG SRDESTGTPT SHGSCQGSPA NESNPLSIHH QEQCVRRGSP EAAAFHPIDK 720 PNTSTRACPV PDTLLTVEPK EPFGGMLIKD AGSSKDLKNL CTSVADAVLD DQVPKFCWPR 780 PSDIAMRQPM ESVCHTVPHI SARQEPSRMT IKATYKDDII RFQISTCTGI VELREEVAKR 840 LKLDVGTFDI KYMDDDREWV LTACDADLQE CVDISKASGS NIIRLLVHDL SVNLGSSCES 900 TRE

Sequence ? help Back to Top

Protein Sequence Length: 903 aa Download sequence

MMATIPNLLP MLALFLLRAG TSNLNSVPQK PIENHKFKIL PVPSENPDGY CLIKEKMAQA  60
LRYIKDLSDQ QVLAQVWAPV KNGDKVVLST SGQPFVLDTQ SNGLHRYRLV SLTYMFSLDT  120
ELDGSLGLPG RVFQQKLPEW TPNVQYYSSK EYSRLRHALD YNVQGTLALP VFDPSGQSCL  180
GVLELIMTSP RINYAPEVDK VCKALQAVNL KSSEILDRPN IQICNEGRQN ALAEILAVLT  240
VVCETHNLPL AQTWVPCRHR NVLANGGGLK KSCTSFDGSC MGRICMSATE VASYVVDAHK  300
WGFREACLEH HLQKGQGVSG RAFSSHSSCF CGDITQFCKN EYPLVHYALM FGLKSCFSIC  360
LRSKFTGDDE YILEFFLPPS LVDYQEQKTL LGAMMATMKQ HFYTLKVASG IKLEEGGIVE  420
VVQASRNGGF ESRLECIHIP PESDAMPNTG EVVALETLQQ RSLMVHDAPK DENNTVRDRE  480
SDNPVPCVQK EVKKTSKRKR GKAEKSISLD VLQQYFAGSL KDAAKSLGVC PTTMKRICRQ  540
HGISRWPSRK INKVNRSLSK LKRVIDSVQG NEGTFGMSSL ATSPLPVAVS SSSHPLTPDG  600
SNQNFFFASQ PSDPQRKETN TSEAQTNNTQ ARLKDQLHRG VSNPEELFHE QNGSLMKLGN  660
GFNNFRTGSG SRDESTGTPT SHGSCQGSPA NESNPLSIHH QEQCVRRGSP EAAAFHPIDK  720
PNTSTRACPV PDTLLTVEPK EPFGGMLIKD AGSSKDLKNL CTSVADAVLD DQVPKFCWPR  780
PSDIAMRQPM ESVCHTVPHI SARQEPSRMT IKATYKDDII RFQISTCTGI VELREEVAKR  840
LKLDVGTFDI KYMDDDREWV LTACDADLQE CVDISKASGS NIIRLLVHDL SVNLGSSCES  900
TRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein