PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023535238.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 193aa    MW: 21773.3 Da    PI: 6.0083
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023535238.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-183685255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  XP_023535238.1 36 LYRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALSIKG 85
                    69****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MSATQPSQIT QPSSSDTNAQ SNPNNKRVRD SSKHPLYRGV RMRAWGKWVS EIREPRKKSR  60
IWLGTFPTPE MAARAHDVAA LSIKGNSAIL NFPELAHSLP RPVSFAPRDV QAAAAKAAHM  120
DPFQYSTDDS DELSEIVKLP SLTTNYLNNE FVLMDSTDGW VYPPPWLRTM DDCSYNHNDD  180
EMGIGDSNFL WDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.16e-72ERF family protein