PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023535415.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 368aa    MW: 39638.7 Da    PI: 5.4439
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023535415.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.7e-20181230255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae Aa a+++a+++++g
  XP_023535415.1 181 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAALAYDEAALRFRG 230
                     7********.**********7.....337*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    
MCLFKVANRR GIGGDLGPFP SGGGDGDGDN GKKLFYSQEN DGDYYSAVGE VSAMVSVLTD  60
VVSGVGAADS NYSGGQVFSS SSSTSTSSPL SSFSSEPSYV SAMSSWVGQK RLREGENAET  120
ERNFDSLSRV FNGQSSSAVI TAVKEEIPIP YTGISNPGTA VAASPMSETA AATAVSDRRR  180
RYRGVRQRPW GKWAAEIRDP HKAARVWLGT FDTAEAAALA YDEAALRFRG NKAKLNFPEN  240
VGLLPPQQQH IPISSPQFVP PRTAALQIQN YRDYMEYSNF LQSSGDFLGQ PSSLLQQMYY  300
NAQLTPFQYL PAPAPSLSSV SNSVFIPPQQ QQQQMGLFRP PRSQNQNQDG SDCFPGTSWN  360
DSGAPSSG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1177182DRRRRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.19e-22ERF family protein