PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023535521.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 178aa    MW: 19697.9 Da    PI: 6.2416
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023535521.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.91.4e-191566156
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    s y+GVr +k +g+Wv+eIr+p   gk++r++lg+f t+e+Aa+a++aa+  ++g+
  XP_023535521.1 15 SSYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSFETPEMAAAAYDAAAYHFRGH 66
                    67*****999.**********8...557***********************99996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MGDPSSTGSH GASTSSYRGV RKRKWGKWVS EIREPGKKTR IWLGSFETPE MAAAAYDAAA  60
YHFRGHDARL NFPHLANSLP FPNGSTPDDI RFAAHRAALR VRTTPGVGVE GDRGSTSSVA  120
PVTVRLSPSQ IQAINESPLD SPKMWMEMSS EFSNGTVFVD EMEDEMWENM HNDSLWDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.14e-56ERF family protein