PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023535991.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 280aa    MW: 30971.2 Da    PI: 6.2323
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023535991.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM84.42.2e-26161561128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....lelee.......vikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknra 77 
                     lppG+ F+P+de+++++yL +k++++          +        ik++d ++++P dLp+        ++++k+wyf+s    +++   r +  
  XP_023535991.1  16 LPPGCCFSPSDEQILCFYLPNKTTASIspnslA---NgvspgynLIKDLDPFDYDPFDLPEsacfcyGSRGRKKHWYFYSVCVFSEK---RGRIR 104
                     79********************88877554440...255556548***************55788654445778******9987654...44446 PP

             NAM  78 tksgyWkatgkdkevlskkgelvglkktLvfykg.rapkgektdWvmheyrl 128
                     +ksgyW+ + + +ev+ ++g + g+k+++vfy g + ++++kt+W+m ey+l
  XP_023535991.1 105 MKSGYWRRKRRAREVIIHRGVVLGMKTSFVFYWGnSIENAVKTNWIMYEYAL 156
                     789*****************************774778999*********87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MELLQPFQPA SSSSCLPPGC CFSPSDEQIL CFYLPNKTTA SISPNSLANG VSPGYNLIKD  60
LDPFDYDPFD LPESACFCYG SRGRKKHWYF YSVCVFSEKR GRIRMKSGYW RRKRRAREVI  120
IHRGVVLGMK TSFVFYWGNS IENAVKTNWI MYEYALGDHF KASFVLHRVF VRGWGLGISG  180
NGLSAYGDGS VSAVCHNGNQ QDGIPVTNGI AGHEMGCAEK PNCVLVTDPV TTLQVPSEAY  240
PCGMMAPSPV TPTGSISIMD GDFIELNDLD DQLDPEDISR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.16e-14NAC family protein