PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023536061.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 192aa    MW: 20907.1 Da    PI: 10.2851
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023536061.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.81.5e-192373256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr ++ +gr++AeIrdp++   ++r++lg+f taeeAa+a++ a+++++g+
  XP_023536061.1 23 RYRGVRKRP-WGRYAAEIRDPRK---KTRVWLGTFNTAEEAARAYDTAAREFRGA 73
                    59*******.**********843...6*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MAAGDKSTST ASAAVASNSK EIRYRGVRKR PWGRYAAEIR DPRKKTRVWL GTFNTAEEAA  60
RAYDTAAREF RGADAKTNFP VPNGFLTVDN NNNFRKSACS SPSQSSTVES SSPSPAPSDP  120
AITHVHAPAI SRPIFFFEAF AQVEKNSDFR RIVTGAGGSR SDSDSSSVVD FDRTRKSRPL  180
DFDLNLPAVE VV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.13e-25ERF family protein