PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023536103.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 317aa    MW: 33651.6 Da    PI: 7.9701
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023536103.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.79e-21136186155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++y+GVr+++ +g+W+AeIrdp     + +r++lg+f+tae Aa+a++ a+++++g
  XP_023536103.1 136 TRYRGVRQRP-WGKWAAEIRDPQ----KaARVWLGTFDTAEAAARAYDSAALRFRG 186
                     68********.**********93....36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MCFLKVANHG GGDNGGGDDP EVMFSSEGEL MAMVSALTHV ISGGAPRASG VGCSSRSDAL  60
ATVVVATTMA TGCSRKRERE DEGGIVKFRA IQSYSMPSPA ILKEEGGSSS RNTIHAATAT  120
AATTTAEFPG KEITRTRYRG VRQRPWGKWA AEIRDPQKAA RVWLGTFDTA EAAARAYDSA  180
ALRFRGSKAK LNFPEFVTTL PLSSPPTPNL APSPVVRPPV FPFDSDYLQY SHLIQNSGEN  240
SGQPAATFDR VLCNSPFVNP NSLISSSGTS SGALNFDLPF AQQQIAYFRP PENQSHGGGD  300
SSMPPPTEFG YRPPATG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.13e-25ERF family protein