PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023536389.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 161aa    MW: 17833.4 Da    PI: 10.2208
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023536389.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.84.7e-172171155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s ++GVr ++ +gr+v+eIr p   gk++r++lg+f ++e+Aa+a++ a+  l+g
  XP_023536389.1 21 SPFRGVRKRS-WGRYVSEIRLP---GKKTRVWLGSFASPEMAARAYDSAAVFLRG 71
                    679****888.**********8...557**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MTKTQPQLIE RRLGSNVSVS SPFRGVRKRS WGRYVSEIRL PGKKTRVWLG SFASPEMAAR  60
AYDSAAVFLR GTSALLNFPD SVGSLPQPES CSREHIQSAA AKAAAQMREM EVGERRVSNG  120
LSRTMFEEMK EAPLLSPLRL AWLGFGPASD EEDNLLLPGY F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25810.14e-30ERF family protein