PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023536402.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 373aa MW: 42630.8 Da PI: 6.7339

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023536402.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.8	2.2e-09	300	335	20	55
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+++gL+++q+ +WF N+R ++ XP_023536402.1 300 YKWPYPSETEKVALAESTGLDQKQINNWFINQRKRH 335 5679*****************************885 PP
2	ELK	37.9	3.9e-13	255	276	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++LlrKYsgyL+sLkqE+s XP_023536402.1 255 ELKNHLLRKYSGYLSSLKQELS 276 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MEEYNNHVNE NSNPRGNFLY PSGVVGGNSS SGNFGRSSNP TAHMGLNSFH LQQGTDCFQT 60 DHSHPIVKTE ASSSHHQLHK FHHPLLRGGG GGQPPPLTTC RPDQHGLLDV EAIKAKILAH 120 PQYSSLLEAY MECQKVGAPP QVVERLVAAR HEFETRQRSS MVSGETIKDP ELDQFMEAYY 180 DMLVKYREEL TRPIQEAMDF MRRVESQLSS LCNGPLRIFN SDEKCEGMGS SEEEQENSGG 240 ETELPEIDPR AEDRELKNHL LRKYSGYLSS LKQELSKKKK KGKLPKDARQ KLLNWWELHY 300 KWPYPSETEK VALAESTGLD QKQINNWFIN QRKRHWKPSE DMQFMVMDGL HPPNTALYID 360 GHYMTDAHYR LGP

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MEEYNNHVNE NSNPRGNFLY PSGVVGGNSS SGNFGRSSNP TAHMGLNSFH LQQGTDCFQT  60
DHSHPIVKTE ASSSHHQLHK FHHPLLRGGG GGQPPPLTTC RPDQHGLLDV EAIKAKILAH  120
PQYSSLLEAY MECQKVGAPP QVVERLVAAR HEFETRQRSS MVSGETIKDP ELDQFMEAYY  180
DMLVKYREEL TRPIQEAMDF MRRVESQLSS LCNGPLRIFN SDEKCEGMGS SEEEQENSGG  240
ETELPEIDPR AEDRELKNHL LRKYSGYLSS LKQELSKKKK KGKLPKDARQ KLLNWWELHY  300
KWPYPSETEK VALAESTGLD QKQINNWFIN QRKRHWKPSE DMQFMVMDGL HPPNTALYID  360
GHYMTDAHYR LGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-128	TALE family protein