PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023536405.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 213aa    MW: 23432.2 Da    PI: 4.583
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023536405.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-182171155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ykGVr ++ +g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa ++l+g
  XP_023536405.1 21 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 71
                    59*****998.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MVKKAENTAA GSSPALPPSK KKYKGVRMRS WGSWVSEIRA PNQKTRIWLG SYSTAEAAAR  60
AYDAALLCLK GASAFASLNF PDVANSVPVS DYCHFRRLHH HIDSSDDIMS PKSIQRVAAA  120
AANGFPENVS AVVTPLSSTV SSPSDQVDDD VSVIFENPTA EMESWCHYFD ALQSPKYVTE  180
MITGDWLDFD SMPEGEIDGF YEEECDISLW SFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.13e-31ERF family protein