PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023536424.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 202aa    MW: 22362.7 Da    PI: 7.1465
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023536424.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.000255173123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++C + F ++  L  H++ H
  XP_023536424.1 51 FSCNYCQRKFFSSQALGGHQNAH 73
                    89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MEPLTDRNPL SGDGEEDDER EPAELSDDRS TLLDLQLSSN SSDATTKPRV FSCNYCQRKF  60
FSSQALGGHQ NAHKRERTLA KRVQRFDWGA AIPLHGGAFD RRSLGIHAHS QQIQKPVGFF  120
SGPGPTSQLW PRPLFMGQQP AVGRLTPEFG GRNFGRFDDV TGWPAIGSSN AGNERSNNVS  180
IVHSQTKPDQ DQTNFLDLSL KL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.13e-31C2H2 family protein