PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023536485.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 319aa    MW: 35506.7 Da    PI: 5.7687
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023536485.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.71.4e-102452851055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR+riN+++  L++l+P+      +K++ +++Le+Av+Y+k Lq
  XP_023536485.1 245 RKRRERINERLRILQKLVPNG-----TKVDISTMLEEAVHYVKFLQ 285
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MDSFGGLSGE GEWDLCSSIL SMEELDFTPL IPPPTAEMPD WFCHLDSFTP NLPSCGNAID  60
QFPCIAAADH YMPMSNAAID ENKMDSIFSA CTDVLLQEIS VFSGEDRYLN MDVQTQIGND  120
HNATNSAKAF HHKRKSIVVA DDDHHHHNNL NNPTKKIRTS NNKIRKATQN SNKKLSTRRR  180
KCEEDQENGG PDMNSCCSAN SSEDDSASQD TNGGGAVLEG EASPPKAKTR ATRGSATDPQ  240
SLYARKRRER INERLRILQK LVPNGTKVDI STMLEEAVHY VKFLQLQIKL LSSDEMWMYA  300
PIAYNGMDIG LHQKLPSFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27740.11e-41bHLH family protein