PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023536493.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 197aa    MW: 22108.1 Da    PI: 9.6734
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023536493.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.4e-191160255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr++  +g+Wv+eIr+p        +r++lg+f+tae+Aa+a+++a+  ++g
  XP_023536493.1 11 KFRGVRQRQ-WGSWVSEIRHP-----LlkRRVWLGTFDTAEDAARAYDQAAILMNG 60
                    89****999.**********8.....334**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MVSRVMVYSR KFRGVRQRQW GSWVSEIRHP LLKRRVWLGT FDTAEDAARA YDQAAILMNG  60
QNAKTNFPAS KDQSTEASHG HGHGSSPMTP KALSELLSTK LRKCCKNPSP SLTCLRLDSD  120
NAHIGVWQKR AGTRATSNWV MRIELGKKEI PSPLPSPEST SQEPDAHRNG IDEEDRIAMQ  180
MIEELLNWNC PLPSISS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25390.21e-72ERF family protein