PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023536498.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 192aa    MW: 21535.4 Da    PI: 9.3373
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023536498.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44.2e-19655255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr++  +g+Wv+eIr+p        +r++lg+f+tae+Aa+a+++a+  ++g
  XP_023536498.1  6 KFRGVRQRQ-WGSWVSEIRHP-----LlkRRVWLGTFDTAEDAARAYDQAAILMNG 55
                    89****999.**********8.....334**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MVYSRKFRGV RQRQWGSWVS EIRHPLLKRR VWLGTFDTAE DAARAYDQAA ILMNGQNAKT  60
NFPASKDQST EASHGHGHGS SPMTPKALSE LLSTKLRKCC KNPSPSLTCL RLDSDNAHIG  120
VWQKRAGTRA TSNWVMRIEL GKKEIPSPLP SPESTSQEPD AHRNGIDEED RIAMQMIEEL  180
LNWNCPLPSI SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25390.22e-72ERF family protein