PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023536580.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 364aa MW: 41629.1 Da PI: 7.5189

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023536580.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.5	1.3e-53	14	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeel+++yLkkkv+ +k+++ evi+e+d++k+ePwdL++k++ ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk + XP_023536580.1 14 VPPGFRFHPTDEELLHYYLKKKVSFQKFDM-EVIREIDLNKIEPWDLQEKCRIgstPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCI 107 69**************************.99**********964433122456********************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 + + +++g++ktLvfy+grap+g+ktdW+mheyrle XP_023536580.1 108 RN-SYKKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLE 143 9.8999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MGSSGGSGGG GGGVPPGFRF HPTDEELLHY YLKKKVSFQK FDMEVIREID LNKIEPWDLQ 60 EKCRIGSTPQ NEWYFFSHKD RKYPTGSRTN RATNAGFWKA TGRDKCIRNS YKKIGMRKTL 120 VFYRGRAPHG QKTDWIMHEY RLEXEYRLED TDDPHFNNSE DGWVVCRVFK KKNLFKVTNE 180 DGGGGSSANS DPQLNNAQSS ASITTPRTFM HRESQYQLRQ PHQNYASLPT FELNKSDLAL 240 HYMPSTAPPS HFPHHLFHPN ISTMNSNHKS LGDASEAYDY PALSSLPPDT PLMVKQLMSN 300 PETSQPADSM TEPWAMLDRL VTSHLGNEDS SKDVRYEDEH GLSSISQINQ LSMRGEMDFW 360 RYAK

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MGSSGGSGGG GGGVPPGFRF HPTDEELLHY YLKKKVSFQK FDMEVIREID LNKIEPWDLQ  60
EKCRIGSTPQ NEWYFFSHKD RKYPTGSRTN RATNAGFWKA TGRDKCIRNS YKKIGMRKTL  120
VFYRGRAPHG QKTDWIMHEY RLEXEYRLED TDDPHFNNSE DGWVVCRVFK KKNLFKVTNE  180
DGGGGSSANS DPQLNNAQSS ASITTPRTFM HRESQYQLRQ PHQNYASLPT FELNKSDLAL  240
HYMPSTAPPS HFPHHLFHPN ISTMNSNHKS LGDASEAYDY PALSSLPPDT PLMVKQLMSN  300
PETSQPADSM TEPWAMLDRL VTSHLGNEDS SKDVRYEDEH GLSSISQINQ LSMRGEMDFW  360
RYAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G10350.1	1e-137	NAC family protein