PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023536614.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 200aa    MW: 21947.7 Da    PI: 4.1483
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023536614.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.4e-182069255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +ykGVr +k +g+Wv+eIr p++   r r++lg+++ +e+Aa+a +aa  +l+g
  XP_023536614.1 20 KYKGVRKRK-WGKWVSEIRLPNS---RDRIWLGSYDKPEQAARAFDAAQFCLRG 69
                    8*****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MEDRRSSGNE TDDKSDQNLK YKGVRKRKWG KWVSEIRLPN SRDRIWLGSY DKPEQAARAF  60
DAAQFCLRGP RAKFNFPDSP PEIEGGDRLT AQEIQAAAAK FAGEHGGDEG GDGYCNDEAV  120
AGEYSCGAVD GGDGGGGWPV WDLLDGGSGL GFDNIMGGNA MICDEDISFG VEEHMEEDEF  180
GDGGGYFYHE PNFLWNFDDH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12228KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.13e-38ERF family protein