PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023536694.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 214aa    MW: 23711.6 Da    PI: 5.2838
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023536694.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-183080155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+GVr +  +g+Wv+eIr+p++   + r++lg+f ++e+Aa+a++ a+++++g
  XP_023536694.1 30 PVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPSPEMAARAHDVAALSIKG 80
                    68*****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MSSDSNAVPK KIKRIRNPES NSDSNSSKHP VYRGVRMRNW GKWVSEIREP RKKSRIWLGT  60
FPSPEMAARA HDVAALSIKG NSAILNFPDL VHLLPRPVSL APRDIQAAAT QAAHMHNLSP  120
NNIPTTTTTT DDASDASDEL TEIVQLPSLG TAYDGDCGDS FVFLDYSTED SAAWLYPPPW  180
LPSLEDYDEI QNDGKMGMGM GFISTNFKGL LWDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-63ERF family protein