PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023536756.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 247aa    MW: 28050.1 Da    PI: 8.4747
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023536756.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.52.4e-1370121155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r++h ++Er+RR+++N+ ++ Lr+l+P +   + ++ + a+i+  A++++k+L+
  XP_023536756.1  70 QRMTHIAVERNRRKQMNEYLSVLRSLMPDS---YIQRGDQASIVGGAINFVKELE 121
                     79****************************...9******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MALEAVVFSQ DLYSLFAGGL SFEYPQIPLD FPEKQTENPP LELESRTPNP VKPRKRRPKS  60
RKNKQEIENQ RMTHIAVERN RRKQMNEYLS VLRSLMPDSY IQRGDQASIV GGAINFVKEL  120
EQQVQFLSTD SSSCSSCSSS CSSSSQTHSS SIADIEVTMV ENHANLKIRS KKRPKQVLKI  180
VAGLQALFLS VLHLNISTMN QVVHYCLSVK VSLSYHCEES LFLTWYQSHA LNLVMIIESS  240
EVMSHER
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17182RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.13e-49bHLH family protein