PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023536898.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 306aa MW: 34984.1 Da PI: 6.195

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023536898.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.6	2.3e-09	229	263	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++e+ LA+++gL+++q+ +WF N+R ++ XP_023536898.1 229 KWPYPSEAEKLALAESTGLDQKQINNWFINQRKRH 263 579*****************************885 PP
2	ELK	36.1	1.4e-12	183	204	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++Ll+KYsgyL++LkqE+s XP_023536898.1 183 ELKNHLLKKYSGYLSTLKQELS 204 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MEDQYNPNFH YHHHQQQHQQ VHDFQISSGG SSKDIDIMKA KIISHSQFSN LLQAFLDCKK 60 VGAPAEVAAE LGSVGEEFEE RRRCSMAASG GCSDPELDQF MEGYYRMLVK YREELTKPIQ 120 EAADFMERVE SQLNTLCNGS FQILASATEN RDGMGSSEEE LEKGGDGGRD ATEQIDPRAD 180 ERELKNHLLK KYSGYLSTLK QELSKKKKKG KLPKDARQEL LRWWEVHSKW PYPSEAEKLA 240 LAESTGLDQK QINNWFINQR KRHWKPSEDV QLMGMEGFYH PNTAAAAAAF YFDGHYMGDA 300 HYRLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-113	TALE family protein