PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023536907.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WOX

Protein Properties

Length: 172aa MW: 19252.2 Da PI: 10.5975

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023536907.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	69.4	4.6e-22	72	131	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq+ +Le l+++ r+p+a+++e+++++l +++ ++V++WFqN++a+e++ XP_023536907.1 72 TRWNPTQEQIAILEMLYRRgMRTPNAQQIEQITAQLgkygKIEGKNVFYWFQNHKARERQ 131 7***************99************************************97 PP
2	Wus_type_Homeobox	119.7	1.3e-38	72	133	4	65
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 tRW+Pt+eQi iLe+ly++G+rtPn+++i++ita+L +yGkie+kNVfyWFQN+kaRerqkq XP_023536907.1 72 TRWNPTQEQIAILEMLYRRGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQ 133 8***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
MGLTMKLHHF SPCSWDEPSL SLACTKRLRP PPPTSATSTL TAFDLKTFIK PDTKKDPSSP 60 RTGVVEMQPG GTRWNPTQEQ IAILEMLYRR GMRTPNAQQI EQITAQLGKY GKIEGKNVFY 120 WFQNHKARER QKQKRNTLGL AHSSPITPPT TTTIVTAIPF DPSVGSSFTI VL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46480.1	7e-50	WOX family protein