PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023537438.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 145aa MW: 16777.5 Da PI: 5.0433

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023537438.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.5	1e-31	85	143	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYG+K+vk+s++pr+YY+C+ +gCpvkk+ver+++dpk+v++tYeg H+he XP_023537438.1 85 LDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDRDDPKYVITTYEGVHTHE 143 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 145 aa Download sequence
MSYNSNQYPA TSESDLAEQP GIEFTDSMFN GWLDVNASSL VDTVMYPGYQ WDEVDELARN 60 TIHQGEPSSV RERFAFKTKS EVEILDDGFK WRKYGKKMVK NSPNPRNYYK CSVEGCPVKK 120 RVERDRDDPK YVITTYEGVH THESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26170.1	6e-45	WRKY family protein