PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023537573.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 323aa MW: 36536.2 Da PI: 5.1581

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023537573.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26	1.5e-08	250	283	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++ee+ +L+ +gL+++q+ +WF N+R + XP_023537573.1 250 KWPYPTEEEKSKLSGITGLDQKQINNWFINQRKR 283 569*****************************88 PP
2	ELK	32.4	2e-11	204	225	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 +LK++Ll+KYsgyL+sLk+ F+ XP_023537573.1 204 DLKEMLLKKYSGYLSSLKKDFL 225 6********************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MEEFYRLNSS VISSYTNGVV ASEAIASTSC GGVHGAQMMN NEMIQLEAET TTGLNMSEII 60 KTQIVNHPLY CKLVSAYIEC QKVGAPPQVA CLLEEIGREN HPPRSCIELG ADPQLDNFME 120 SYCEVLHQYK NELTKPFNEA TMFLTNIELE LSNLCKGSFT ATSDSRPATN DEVAETPEDE 180 PGSYREVEMP GNHEPFGTRQ TNQDLKEMLL KKYSGYLSSL KKDFLKKRKK EKLPKDARMA 240 LFDWWNTHYK WPYPTEEEKS KLSGITGLDQ KQINNWFINQ RKRHWNPPEE MRFALMDSVG 300 TGVGECIKGS NFYDNGGTGG RVV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	220	229	LKKDFLKKRK
2	226	230	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	4e-75	TALE family protein