PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023537802.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 318aa    MW: 35257.2 Da    PI: 6.922
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023537802.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.57.9e-193786255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa+a++ a+++++g
  XP_023537802.1 37 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAARAYDCAARSMRG 86
                    59*******.**********93....35999**********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MKCNATATTA ATTTTTTGAA NILKRTLRDH NSSGTMRYRG VRRRPWGRYA AEIRDPQSKE  60
RRWLGTFDTA EEAARAYDCA ARSMRGLKAR TNFVYPSSPP PPPHSLSDYP IPHFNLAKQS  120
HPSLPRHLGL NSSNWPIFCT PNRGSDFVWS GSHKINTASP TLDMLLLRDF LNFPSSNCSL  180
NPGSINNTTP VISKSLGDPL HQNYSSSEFV PKEDSPDSGL LEEIIHGFFP KSHSNSSTPT  240
TNFNSDLPFD ALKNDNNAAN NLEHLDNLDY PDSIHHILDN FNAPQLGLPH GHPQNLILDD  300
IFHCPELLNL PAPELENA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.17e-16ERF family protein