PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023537868.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 94aa    MW: 10505.6 Da    PI: 8.4591
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023537868.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.92.2e-081157246
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     ++W++   + + +a + + ++   +W + a  +g g+t++++k ++ +
   XP_023537868.1 11 NSWSPKQNKVFENALTVYDKDspdRWQKLAGAVG-GKTAEEVKRHYEM 57
                     58********************************.***********76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
SSSSSSSSSS NSWSPKQNKV FENALTVYDK DSPDRWQKLA GAVGGKTAEE VKRHYEMLVE  60
DVHNIEIGRI PLPNYSNSSN QCYSNEQRLK GLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.21e-28MYB_related family protein