PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023538249.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 101aa    MW: 11436 Da    PI: 9.8245
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023538249.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.11.3e-101558344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                      WT+   +++ da + ++ +   +W ++ar +g g+t++++k ++
   XP_023538249.1 15 TWTPKQNKKFEDALAFYPEDtpdRWQKVARAVG-GKTAEEVKRHY 58
                     7********************************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    
MASNTFRSSG SSSSTWTPKQ NKKFEDALAF YPEDTPDRWQ KVARAVGGKT AEEVKRHYDI  60
LVHDLMHIES GKVPLPKYKP IASNSIVCGD EQRLMKNLKL Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.24e-37MYB_related family protein