PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023538461.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 167aa    MW: 18896.4 Da    PI: 7.6029
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023538461.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.11.9e-17754253
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                    +y+GVr+++ +g+Wv+eIr+p        +r++lg+f tae+Aa+a++ a++ +
  XP_023538461.1  7 RYRGVRRRH-WGSWVSEIRHP-----LlkTRIWLGTFETAEDAARAYDGAARLM 54
                    69****998.**********8.....334*******************999866 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MARPQQRYRG VRRRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDGA ARLMCGPRAR  60
TNFPFNANDS NSFELFSANL TAKLHRCYMA SLHLTNPSPQ KPAMPVTTEN ERVAAAAAVK  120
RGQTEMVAHQ PFEALEEDDI EQMIEELIHY GSVELCSVMP PPPSQAF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.13e-50ERF family protein