PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023538479.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 240aa MW: 27242.8 Da PI: 4.6266

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023538479.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.4	4.5e-12	60	102	7	54
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 Er+RR+++N+++ Lr ++P+ +K++Ka+i + A+ YI++L XP_023538479.1 60 VSERNRRKKLNDRLIALRAVVPNI-----TKMDKASIIKDAIAYIQEL 102 57*******************7.....7**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MDNILDEYLK YWETDMFLLT EDSGSGGWGL EEAFYGAYNS SSPEGKVSPS SPSEASKNIV 60 SERNRRKKLN DRLIALRAVV PNITKMDKAS IIKDAIAYIQ ELRAEEKRIE TEIFNLESSV 120 NNERSRTTNQ WNNENGDQIW TNMKWNQQTT DASSSSSIKV LDLSVNYVGE KVMVVSLTCL 180 RRGDTILKVW EVIESLKLKI ITANISVIAN KLLNTLFIEA EREEEEELKV QIETAIAHMG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57150.1	1e-60	bHLH family protein