PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023538685.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ARR-B
Protein Properties Length: 577aa    MW: 65650.8 Da    PI: 6.7329
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023538685.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like38.91.9e-12261309255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      r++W+ e  ++F +a+++LG      Pk il+lm+ ++Ltl +v+ HLQkY+ 
  XP_023538685.1 261 SRIVWNLERRRKFSDALNKLG-----RPKLILKLMNEPCLTLRQVANHLQKYKA 309
                     69******************4.....6*************************85 PP
2Response_reg49.22.9e-17211261107
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     +l+vd e l ++ l ++l+++ y +v+++  g  al +++ek   +Dl++  ++mp+md + +l  + + +  + +i+++++ + + a++al  G
  XP_023538685.1  21 ILVVDHETLSLKHLSSLLRQQSY-NVTTTGLGCIALSMIQEKGdqFDLVMANVSMPDMDSFSFLHVLLKMN--IAVIFMSSTMNLKVATKALAEG 112
                     89*********************.***************999889**********************8865..********************** PP

                     ESEEEESS--HHHH CS
    Response_reg  94 akdflsKpfdpeel 107
                     a  fl Kp+++++l
  XP_023538685.1 113 ACYFLQKPVSKDDL 126
                     ***********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 577 aa     Download sequence    
MQEMDHWVPD SLPSFTKKLH ILVVDHETLS LKHLSSLLRQ QSYNVTTTGL GCIALSMIQE  60
KGDQFDLVMA NVSMPDMDSF SFLHVLLKMN IAVIFMSSTM NLKVATKALA EGACYFLQKP  120
VSKDDLKYVW QHVYRSNINI AKLTHKANCV DKAKSGQEFV GFQNDNPVVL SRSTDTASYN  180
NNYSINYQLM SHNEKVQNMP TNSHDTLVAS YFEGERSADD IEGTNKEGVT YYSKPTNFEH  240
TKADEDNGRG KEYYISRNTR SRIVWNLERR RKFSDALNKL GRPKLILKLM NEPCLTLRQV  300
ANHLQKYKAQ VESIKKGRKN KLAPRMEASK FDCSVMTQLP PLVQRQQNHE ANKFIQQNHE  360
ANKSTQQNHE TNKSTQQNHE ANKTTQGGST SLSGGKRFRL IAPKPALNPR LLVSANFVNH  420
GLIMFDHNFQ HVASNYNSVP YSINKTTPEV TSYRAFDEIQ FPDIHQVDVA QQLEAMEFCG  480
TSEGIQLMSK NIALPDSTNL DNIAANFGNE GSQQQFAECD YILNVLEDNP YDLRNDFSLS  540
DVDKYSEWLR NTVLEDESGL DKFINDDAEI FPVEINQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1268273ERRRKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68210.13e-36ARR-B family protein