PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023538722.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 225aa    MW: 25105.4 Da    PI: 4.9549
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023538722.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.61.3e-0974121454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++  rEr RR r+N++f  L   l ++   +  K +K +iL  A++ +++L
  XP_023538722.1  74 SKACRERLRRGRLNDRFLDLSHALEPD---RPAKTNKPAILDDAIRVLNQL 121
                     6789**********************9...99****************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MDPLEDPSCS DFLDYSLFAD ADNIVSPSLG PLWLPNDFRD GGADTGVSAG RVESEETDCL  60
RKRVRDEPCT GPTSKACRER LRRGRLNDRF LDLSHALEPD RPAKTNKPAI LDDAIRVLNQ  120
LKTEAEELKQ TNEKLREEVE CLKAEKNDLR KEKTILKEDK ERIEQQLKSI AIPPPGLIPG  180
HPAAYHAAPG KMAVFPGYGL IPMWPYLPPS VCDTSQDHEL RPPAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14410.23e-54bHLH family protein