PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023538850.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 257aa    MW: 29023.4 Da    PI: 5.7435
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023538850.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.77.9e-2081130255
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+W+AeIrd +     r +r++lg+++t+eeAa  +++a+ +l+g
  XP_023538850.1  81 KFRGVRRRP-WGKWAAEIRDpF-----RrTRVWLGTYDTPEEAAVVYDQAAVRLKG 130
                     89*******.**********66.....45************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MGRVCSGGIR FREIRTTTHK PATETKLVRI SFTDGDATDS SSGEDEEPIS IRHVKRHVTE  60
IRLLTRSSKK SPPKSGAEPR KFRGVRRRPW GKWAAEIRDP FRRTRVWLGT YDTPEEAAVV  120
YDQAAVRLKG PNALTNFAEA PISESTVATL LTPPPPAAAA SDSEESRSLC SPTSVLRLEE  180
QIWRPIEHVS EESALEMELN WLYDRNSNSL LFNSRTPQPI NSDEMGDFGD IPMDFESCKW  240
DVENYFQDPT FSISLTH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-40ERF family protein