PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023538859.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 308aa    MW: 34365 Da    PI: 4.2394
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023538859.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96e-19119168154
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                     s+y+GVr++k +g+W+AeIrd +     + +r++lg++ taeeA +a++  r+++e
  XP_023538859.1 119 SQYRGVRQRK-WGKWAAEIRDpF-----KgARIWLGTYNTAEEASQAYESKRLEFE 168
                     78*******9.**********55.....45**********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MSEPRVLQLT NQRCFGKKSK SRPEEPKMTR KIRVICDDPD ATDLSSSEDE GEIETRSLKF  60
KRIIGEIHLP CFPYQSKSID VTTTTPSSSQ DSNNGSKNPE LKKKRVLGTK TLSTRKTASQ  120
YRGVRQRKWG KWAAEIRDPF KGARIWLGTY NTAEEASQAY ESKRLEFESA MAAATPKSSN  180
ISSSSSTEEI EEESDSVVSQ TSPAADIVEM ETSSFVSIKE EELQMPELGF VGEGLETNLG  240
LVPELDPFFM DDIGQFLDDF TAMDDLHIFG FDDDDDDEPS GLPDCDFNDF GNVDLSCWVD  300
EALNVPCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.13e-29ERF family protein