PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023538900.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 312aa    MW: 35533.4 Da    PI: 5.5416
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023538900.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.12.5e-193584255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+GVr++  +g+WvAeIr+p++   r+r +lg+f taeeAa a+++a+ +l+g
  XP_023538900.1 35 EYRGVRQRT-WGKWVAEIREPKK---RTRLWLGSFATAEEAAMAYDQAATRLYG 84
                    69****999.**********965...5************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MDSGSRDKKS HSPLLKPWKK GPSRGKGGPL NASCEYRGVR QRTWGKWVAE IREPKKRTRL  60
WLGSFATAEE AAMAYDQAAT RLYGPDAYLN LPHLQPNSSA AKSNIFKWVP SKNFISMFPH  120
HRPAGFMLNL NAQPSVHLIH QRLQQLQTSR GFLTPSKKVE DKRETEGEKD DEAPVDDEAV  180
TTTTTIRAVE EKPQIDLNEF LQQLGIMKEE EEKVIESSEG EEGNGGCCLG SESSNNNLKD  240
HYSDELEVLS DKSFNWDSIM DVHANIEDLH HHHHHQIGNF EVYDYVYNYE DDLSFPNSIW  300
DFQEDHSTGI IP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.14e-62ERF family protein