PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023538904.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family FAR1
Protein Properties Length: 208aa    MW: 24064.6 Da    PI: 7.8212
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023538904.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR186.44.2e-2743131290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     fY++YA++vGF +r+ + ++s+++g+i  r++ C+keg+  + + k    r++r++tr gCka+++vk +k+gkw++tk+++eHnH+l+
  XP_023538904.1  43 FYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLV 131
                     9**************************************999999989***************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MDADEGGSFE SPAATELIEC DGDIILEPYE GMEFESEDAA KIFYDKYARQ VGFVMRVMSC  60
RRSEKDGRIL ARRLGCNKEG YCVSIRGKFG AVRKPRPSTR EGCKAMIHVK YDKSGKWVIT  120
KFVKEHNHPL VVSPREARQT MDEKDKQIQE LTTELRNKKR LCLTYQEQLA AFMKIVEEHT  180
DQLSRKVQNV VTNLKEFESL EQELLHPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.11e-114FAR1 family protein