PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023538953.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 448aa MW: 50969.1 Da PI: 7.0365

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023538953.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	158.3	3.2e-49	13	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+GfrFhPtdeel+++yLk+k+ g++ + + i++vdi+k+ePwdLp + +++e+ew+fF+ +d ky++++r+nratk+gyWk+tgkd+++l XP_023538953.1 13 LPVGFRFHPTDEELINHYLKNKMLGRESLV-DYIRQVDICKHEPWDLPFlsNDHTSEQEWFFFAAQDLKYSNSRRSNRATKTGYWKSTGKDRKIL 106 79***********************777.99***********4334445788********************************* PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++l+g+kktLvfy+gr ++g +t+Wv+hey+l XP_023538953.1 107 APrTKKLIGTKKTLVFYSGRVSNGIRTNWVIHEYQL 142 9867788*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MADCIVLPSG DLLPVGFRFH PTDEELINHY LKNKMLGRES LVDYIRQVDI CKHEPWDLPF 60 LSNDHTSEQE WFFFAAQDLK YSNSRRSNRA TKTGYWKSTG KDRKILAPRT KKLIGTKKTL 120 VFYSGRVSNG IRTNWVIHEY QLHSDPQFAQ LVSGYDFSEL ESLLFSDREP ISMDFQANNS 180 HVTQVNEPND EAIDIEEIYF HEGTPNSSIS DFNWKEYLEM VEEDQGGALN GDTGMYATLN 240 LQGNSTSHSM FDEHSSRVPT QTTPIIKESR RSPLTSKIFK YGGEEDLSSV RPRGDELQTN 300 GISYLSDDPD RETITLRFQG QPRSDKVVNH AKDSQNIQWK RKTQLQVVSS PDKAKAVSKW 360 KKVDRAAATS NKDIVVDRES EVKSLVAHQS SSTGRWSVES RGKRCSSILT TKCIHHRSSP 420 ASAYVARVCI GLILFFVVAR DMLLDGNW

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MADCIVLPSG DLLPVGFRFH PTDEELINHY LKNKMLGRES LVDYIRQVDI CKHEPWDLPF  60
LSNDHTSEQE WFFFAAQDLK YSNSRRSNRA TKTGYWKSTG KDRKILAPRT KKLIGTKKTL  120
VFYSGRVSNG IRTNWVIHEY QLHSDPQFAQ LVSGYDFSEL ESLLFSDREP ISMDFQANNS  180
HVTQVNEPND EAIDIEEIYF HEGTPNSSIS DFNWKEYLEM VEEDQGGALN GDTGMYATLN  240
LQGNSTSHSM FDEHSSRVPT QTTPIIKESR RSPLTSKIFK YGGEEDLSSV RPRGDELQTN  300
GISYLSDDPD RETITLRFQG QPRSDKVVNH AKDSQNIQWK RKTQLQVVSS PDKAKAVSKW  360
KKVDRAAATS NKDIVVDRES EVKSLVAHQS SSTGRWSVES RGKRCSSILT TKCIHHRSSP  420
ASAYVARVCI GLILFFVVAR DMLLDGNW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10490.1	1e-49	NAC family protein