PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023539022.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Protein Properties

Length: 243aa MW: 27402.5 Da PI: 8.1085

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023539022.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	108.1	4.4e-34	37	141	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k ltpsdv+k++rlv+pk++ae++ g ++ l++edesg+ W+++++y+++s++yvltkGW +Fvk+++L++gD+vvF++++r++ XP_023539022.1 37 FEKPLTPSDVGKLNRLVIPKQYAEKYfplspgGDTADKGLLLSFEDESGKMWRFRYSYWNSSQSYVLTKGWTRFVKEKRLDAGDVVVFERHRRDG 131 99***************************8666668999********************************************999999 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 +l++++ r+ XP_023539022.1 132 DRLFIGWKRR 141 99**9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MSLNHFSSDC HLHHPKSSAS AVDHHLIHHH HHKHPMFEKP LTPSDVGKLN RLVIPKQYAE 60 KYFPLSPGGD TADKGLLLSF EDESGKMWRF RYSYWNSSQS YVLTKGWTRF VKEKRLDAGD 120 VVVFERHRRD GDRLFIGWKR RSPVSTAETA AATRVFCSSN PYPSHHHNHN HLPSPPYQSS 180 DCPHAESSVQ SQTVSVGNSK ILRLFGVDLE CQTDVSEPEQ PSTLGGGSGL SGQDPTLHSF 240 YTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36080.1	3e-65	B3 family protein