PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023539113.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 249aa    MW: 27549.7 Da    PI: 6.6988
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023539113.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.4e-1972121356
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     ++GVr +  +g+Wv+eIr+p++   ++r++lg++ tae+Aa+a++aa+++++g+
  XP_023539113.1  72 FRGVRKRN-WGKWVSEIREPKK---KTRIWLGTYPTAEMAARAHDAAALAIKGH 121
                     79***887.**********854...6************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MILNHIRLCL CLCPSHHHRM EPFFNYIQAS DAKPTIICSS SSVATSHGNG HISGNTKQRT  60
SEEEDKSHHN MFRGVRKRNW GKWVSEIREP KKKTRIWLGT YPTAEMAARA HDAAALAIKG  120
HSAFLNFPEL ARFLPRPLSK SHKDIQAAAA QAAATTFSEG NNREGEGREA AENMETLFSG  180
SDGGERAEDS TNSPSTAASD ETFFDLPDLF VGSSDLKDGF LCHSSLWQFC AAADHSGLRL  240
EEPSFWETI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.15e-36ERF family protein