PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023539438.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 167aa    MW: 18243.7 Da    PI: 9.9263
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023539438.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.5e-2065116256
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56 
                     +++GVr+++ +g+++AeIrdp   + k +r++lg++ taeeAa a+++a+ +++g+
  XP_023539438.1  65 QFRGVRRRP-WGKYAAEIRDP---NrKGARIWLGTYQTAEEAALAYDRAAFQMRGA 116
                     58*******.**********9...6566*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MSSNSNCSQG SSSEVFLLEW IRRHLLEDEL DSVGGLGKNT PSLTSIDGVT DTETPGKGSS  60
IRGLQFRGVR RRPWGKYAAE IRDPNRKGAR IWLGTYQTAE EAALAYDRAA FQMRGAKAKL  120
NFPHMIGSAE ALIGIGCCHP KRASPDSPPP LFSVKRPRTD SPAMPRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.11e-28ERF family protein