PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023539493.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

C2H2

Protein Properties

Length: 184aa MW: 19582.4 Da PI: 5.6375

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023539493.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.9	1.8e-05	22	44	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ Cg F++ L+ H+r+H XP_023539493.1 22 FKCGFCGSEFRSEKALHGHMRSH 44 89********************9 PP
2	zf-C2H2	12.9	0.00032	133	155	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C Cg+ F ++ L H +++ XP_023539493.1 133 YPCDFCGEAFASPQALGDHKSSC 155 99***************999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 184 aa Download sequence
MGKRKAADGD GDCDGSDRKN RFKCGFCGSE FRSEKALHGH MRSHPERNWR GMNPPVSAAA 60 VTATGSFSSS SSSSGGVDHE VRDRDCYSPL LTWSTTACRG RRPIGSSSSA SSGVVDATDT 120 GKENTDALLR NEYPCDFCGE AFASPQALGD HKSSCPCKPT ENGPQETKLL GFDLNELPPE 180 DGEA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17180.1	1e-09	C2H2 family protein