PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023539533.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 170aa    MW: 18294.4 Da    PI: 6.6332
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023539533.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-18859156
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                    + y+GVr++  +g+Wv+eIr+p+    +  r++lg+f tae+Aa a++ a+++l+g+
  XP_023539533.1  8 PVYRGVRRRN-TGKWVSEIREPR----KpNRIWLGTFPTAEMAAVAYDVAALALKGH 59
                    68*****887.9*********94....478************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MATSGRHPVY RGVRRRNTGK WVSEIREPRK PNRIWLGTFP TAEMAAVAYD VAALALKGHD  60
THLNFPNSAS SLPVPASRSP SDIQAAAASA AAALGAAAAA IEARSGFHGG RSNDPGEVGN  120
HFMDEDLIFD MPNVLMNMAE GMLLSPPRFN NHGGDDDRAD HGTENLWNFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.13e-44ERF family protein