PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023539556.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WOX

Protein Properties

Length: 247aa MW: 28053.3 Da PI: 6.0385

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023539556.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	40.9	3.5e-13	93	130	24	57
S--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 24 ypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 yps+++++e++++l +++e++V++WFqNrRa+ k+ XP_023539556.1 93 YPSKQKIKEITSELgqhgQISESNVYNWFQNRRARSKR 130 9***********************************97 PP
2	Wus_type_Homeobox	59.2	9.7e-20	93	132	26	65
Wus_type_Homeobox 26 tPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 P+k++i++it+eL ++G+i++ NV++WFQNr+aR+++kq XP_023539556.1 93 YPSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQ 132 59************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MMDPYHHHHQ NPPLRDDHLR YLTGTTAGAL YVKVMTDEQL ETLRKQIAVY ATICEQLVEM 60 HKTLTARQDL KGAAMLFSFT SFNSMDELGL LLYPSKQKIK EITSELGQHG QISESNVYNW 120 FQNRRARSKR KQQGTAPAYG ESELDTEVES PKDKKTKPVD FQTPQTSAPL GENMGFQSPE 180 MHYELHFLDP NTNKADTLFP SNGSSKTART FSQMSSYEGN EQLTGKIETP ENYSLYSQAE 240 GCMTEQP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	132	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	3e-47	WOX family protein