PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023539579.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 218aa    MW: 24388.2 Da    PI: 4.7036
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023539579.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.56.7e-1886136356
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     y+GVr+++ +g+++AeIrd + +g   r++lg+f++ae Aa a+++a+ +++g+
  XP_023539579.1  86 YRGVRRRP-WGKFAAEIRDSTRRG--IRVWLGTFDSAEAAALAYDQAAFAMRGA 136
                     9*******.**********43343..*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MDYSGFFSPA SDFSSESSFD SPESSFINLD HDFLPFNEND SEEMVLYEMI SEGRQDSSEK  60
GIGAVRIKEE EVDSVGEESP KKERSYRGVR RRPWGKFAAE IRDSTRRGIR VWLGTFDSAE  120
AAALAYDQAA FAMRGATAIL NFPVDRVRES LKEMNCGGDG YGLAEDGGSP VIALKRKHSV  180
RRNGISKKKK ERDVRIQNMV VLEDLGTEYL EELLGCSC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175190KRKHSVRRNGISKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.11e-55ERF family protein