PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023539674.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 235aa MW: 25854.5 Da PI: 5.9114

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023539674.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.1	2.1e-10	80	127	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ rE+ RRdr+N++f eL l + ++ K +Ka+iL Av+ + +L XP_023539674.1 80 SKACREKLRRDRLNDKFLELGATLEPG---RALKTDKAAILIDAVRMVTQL 127 6789********************9...9*************99988 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MVSPETTNWL FDYALIDDIP VPDDANFSAP TAGFSWSMQP FNASSDVSAE IEGSLLESDG 60 LKEPGSKKRV RTESSCASSS KACREKLRRD RLNDKFLELG ATLEPGRALK TDKAAILIDA 120 VRMVTQLRGE AQMLKDSNTS LLEKIKDLKA EKNELRDEKH RLKLEKEKLE QQLKATNSQP 180 GFMPPAIPAT FAAQGQAPGN KLVPFIGYPG VAMWQFMPPA AVDTSQDHVL RPPVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G54680.1	6e-94	bHLH family protein