PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023539687.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NF-YA
Protein Properties Length: 322aa    MW: 35714.5 Da    PI: 9.1045
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023539687.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA95.75.4e-30154210158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     dep+YVNaKQy++I++RRq Rak+  +++  +++rkpy+heSRh hA+rRpRgsgGrF
  XP_023539687.1 154 DEPIYVNAKQYHGIIRRRQIRAKAMMKNRP-ARTRKPYIHESRHLHAMRRPRGSGGRF 210
                     79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MAPQTGYLKE HEGIVPNSLG QLSSSPTRLW SAAFGLGSHS IFGDFGQVKE QLDSNGKEFA  60
ATKQAAHGLE KLNTAPFSIY PGDTKNSVDA QKPSPVFSLQ SPLSEYHNRF ELGFGQPLIC  120
ENYPYMEQHY GILSAYGPQI PGRVMLPMRL TTDDEPIYVN AKQYHGIIRR RQIRAKAMMK  180
NRPARTRKPY IHESRHLHAM RRPRGSGGRF LNMKNQPNEK SSMVPKKVDD VNLSDLTGSQ  240
CSEVLQSESG TLNSQNEAKE GRGFNLLSSE VSSMFSRGLQ RFQINHIGPS MQSLAEIIDG  300
GGHGMVLPKW VAAADNCCDL CF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.29e-59NF-YA family protein