PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023539924.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 388aa    MW: 43539.7 Da    PI: 7.1362
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023539924.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.43.2e-17117165355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + GVr+++ +gr++AeIrdp++   + r++lg+f+ta eAa a+++a+++++g
  XP_023539924.1 117 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAHEAALAYDRAALSMKG 165
                     56******.**********965...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MTCKMYFFFF FSFLFLLHQL TLFKKSFKSC FNPSSQTQKT SKASLYLCCK LFFPFIFYWF  60
FPFVLMATSK ASDKAYPIYE TAQSQMGFAL IQRNSSPISQ SGGERRGRRK QAEPGRFLGV  120
RRRPWGRYAA EIRDPTTKER HWLGTFDTAH EAALAYDRAA LSMKGTQART NFIYSDTSTF  180
HSILSAFDVQ TLLPNSDTHS PVLHQAQSQP SIPQTSSNHH VSANDHDTNF FFSNDSNSGY  240
LSCIVPDNCL KPPSDSTHKT QLKNSHRSIE SNDHLQKFSF FGSNSIDTLP FEGLDVSAMT  300
YGSVVNEPNC CNDGMWEKQQ IWESNGDELS AIINSSSSSS SSSAMVAEDE AFHPFMNSSY  360
GGLLPQSSTC CPSVPPFGDA FDFGYPLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.15e-66ERF family protein