PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023540061.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 429aa MW: 48029.9 Da PI: 7.0495

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023540061.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.4	1.4e-09	287	319	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yps +++ LAk++gL+ +qV++WF N R + XP_023540061.1 287 HPYPSDTDKLMLAKQTGLSRSQVSNWFINARVR 319 89*****************************88 PP
2	BELL	71.4	1.6e-23	167	235	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 l + k+ L+s+l+eV+++Ykqy+ q++ v+ sFe + glg+a+pY++ A ka+ F++Lk+ai +q+ XP_023540061.1 167 SLASNKSTLVSMLDEVYRKYKQYYLQIEEVMTSFEYISGLGNAAPYANQAIKAMYAYFQSLKNAILDQL 235 567899************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
MADGIESFDH VPQQSRRDKL REQPDRSSFL PFYDPSLISS SDILSTAAAA AAAANNPLFQ 60 FHHPFFDTQI PSSLLPDSNN SVLLNHCYAA FKPEPLSLSL SSHPYLSTVN VPLGPFTGYA 120 SILKGSRFLK PAQQLLEELC DVVGLQRTQS SSATSGSLSD CGVVHHSLAS NKSTLVSMLD 180 EVYRKYKQYY LQIEEVMTSF EYISGLGNAA PYANQAIKAM YAYFQSLKNA ILDQLKFNKR 240 THGGDYSQRS VRNPGFLDHQ PVWRPQRGLP EQAVTVLRGW LFDHFLHPYP SDTDKLMLAK 300 QTGLSRSQVS NWFINARVRL WKPMVEEIYN LETKQTQKNC HREEDRNEHP PSRNEPHDIP 360 MGIQDEPFNI CYNLSSHSHM ASNNNNSGVS LTLGLHQNNG IGGFPVGYVM GGHFGRDVVG 420 TQLLHDFVG

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

MADGIESFDH VPQQSRRDKL REQPDRSSFL PFYDPSLISS SDILSTAAAA AAAANNPLFQ  60
FHHPFFDTQI PSSLLPDSNN SVLLNHCYAA FKPEPLSLSL SSHPYLSTVN VPLGPFTGYA  120
SILKGSRFLK PAQQLLEELC DVVGLQRTQS SSATSGSLSD CGVVHHSLAS NKSTLVSMLD  180
EVYRKYKQYY LQIEEVMTSF EYISGLGNAA PYANQAIKAM YAYFQSLKNA ILDQLKFNKR  240
THGGDYSQRS VRNPGFLDHQ PVWRPQRGLP EQAVTVLRGW LFDHFLHPYP SDTDKLMLAK  300
QTGLSRSQVS NWFINARVRL WKPMVEEIYN LETKQTQKNC HREEDRNEHP PSRNEPHDIP  360
MGIQDEPFNI CYNLSSHSHM ASNNNNSGVS LTLGLHQNNG IGGFPVGYVM GGHFGRDVVG  420
TQLLHDFVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	2e-83	TALE family protein