PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023540129.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 290aa    MW: 32495.7 Da    PI: 7.9412
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023540129.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM165.32.2e-5191341128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lp+GfrF Ptdeel+v+yL++kv+g++++l   i+evd+yk++Pw Lp+k+  +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk + s 
  XP_023540129.1   9 LPAGFRFFPTDEELLVHYLCRKVAGHHFSL-PLIAEVDLYKFDPWALPEKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISS- 101
                     799************************999.78***************8888899*********************************999998. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +g+ vg+kk Lvfy g+apkg+kt+W+mheyrl
  XP_023540129.1 102 EGKSVGIKKALVFYVGKAPKGTKTNWIMHEYRL 134
                     999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MDPLAQLSLP AGFRFFPTDE ELLVHYLCRK VAGHHFSLPL IAEVDLYKFD PWALPEKALF  60
GEKEWYFFSP RDRKYPNGSR PNRVAGSGYW KATGTDKIIS SEGKSVGIKK ALVFYVGKAP  120
KGTKTNWIMH EYRLIASSRK TGSSKLDDWV LCRIYKKNSS SQKPTGSISS TEYGNVSPSS  180
SSSSHIDEVI KGLPEIRDDS FAYPKATLQQ NDINKFNFEI PGDSIISDWA SLAGLYSVPE  240
LAPMDPPQPG TFNYNNNSAD LYVPSITAPF CQVDYLPQQR DCTRTYGFSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-115NAC family protein