PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023540206.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Trihelix

Protein Properties

Length: 298aa MW: 35255.7 Da PI: 8.5038

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023540206.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	76.7	3.6e-24	56	138	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ qe+++ + +r e+++r+ ++k++k lWe ++km+e+gf+rs++qCk+kw+nl +ryk ++++e + s++++p++++l+ XP_023540206.1 56 QWSIQETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYKGCETMEPEI---SRQQFPFYTELQ 138 7******************************************************************97...55679**997 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MEGHNPHPLV HLHLQQQQHQ QLQHPPPPPP PQQQQHLHQN LADQTAVNAV ADRFPQWSIQ 60 ETKEFLMIRA ELDQRFMETK RNKLLWEITA AKMKEKGFNR SAEQCKCKWK NLVTRYKGCE 120 TMEPEISRQQ FPFYTELQAI FGARMHRILW AEAESGGSGS KKKTTVLSSD EDDENEDSDG 180 DGGDTKASGR KSKRKGKGNG GGSSSINHLK EILEDFMNQQ IQMEIQWREA FESREKERQI 240 REMEWRRKME ALEHERIMLE RRWREREEQR RMRDEVRAEK RDALITALLN KLRRDDHI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G01380.1	6e-54	Trihelix family protein