PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023540293.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 288aa    MW: 33842.7 Da    PI: 6.4478
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023540293.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM178.71.5e-5571381129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPtdeel+++yL+kkv +k++++ +vik+vd+yk+ePwdL++  ++ + ++++wyfFs++dkky+t++r+nratk+g+Wkatg+dk++
  XP_023540293.1   7 VPPGFRFHPTDEELIDYYLRKKVGSKRIDV-DVIKDVDLYKIEPWDLQElcRMGGqDQEDWYFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAI 100
                     69****************************.9***************9545554425559*********************************** PP

             NAM  93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
                     +s+ ++el+g++ktLvfy+grap+g+k+dW+mheyrle
  XP_023540293.1 101 YSRyGHELIGMRKTLVFYRGRAPNGQKSDWIMHEYRLE 138
                     **988899****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MNTILHVPPG FRFHPTDEEL IDYYLRKKVG SKRIDVDVIK DVDLYKIEPW DLQELCRMGG  60
QDQEDWYFFS HKDKKYPTST RTNRATKEGF WKATGRDKAI YSRYGHELIG MRKTLVFYRG  120
RAPNGQKSDW IMHEYRLETS ENGAPQEEGW VVCKVFKKKM TTAQKMGDYE SPYWQDDQIS  180
FMPQIDSPNQ ISQPCKHEID HLHFTVFDDA FPQLPRHLEL NSDMSSCSYD PRSNAPSSSQ  240
TFFHGVDNKL MDWQAMDRYV ASQLSTDRDD HHGRDEANYS HPTKYASE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62700.14e-99NAC family protein