PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023540316.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 169aa    MW: 19249.6 Da    PI: 10.8481
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023540316.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95e-18100148153
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkl 53 
                     ++y+GVr++k +g+W+AeIrd + +   r+r++lg++ taeeA + ++  r+++
  XP_023540316.1 100 CRYRGVRQRK-WGKWAAEIRDpF-K---RARIWLGTYNTAEEASRVYESKRLEF 148
                     78*******9.**********55.3...5********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MLLKXKKKKK KKSSRNPLEE QKMSRKIRVI CSDPDGTDSS SSENERDETK SSKSKRIVRE  60
IHFPNFPSRA SKSIDDEISR SSSQDSNNGD KSFTNRGTAC RYRGVRQRKW GKWAAEIRDP  120
FKRARIWLGT YNTAEEASRV YESKRLEFQT AMAAAAAPKP PAGSKLLIC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1612KKKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.12e-31ERF family protein